Bra-MIR156b

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  TCATGCTTGAAGC                  A          ------    C  T   -    -    - CAATACTTCAAATATTCTATAAGAGATGCATATATTTTAATTT
               TATGTGTGCTCACTCTCT TCTGTCACCG      CCTT TC CTC TGCA TCTC T                                           
               |||||||||||||||||| ||||||||||      |||| || ||| |||| |||| |                                           T
               GTACACACGAGTGAGAGA AGACAGTGGT      GGAA AG GAG TTGG AGAT C                                           
TACGTTCTTTCGGTG                  -          AGTAAA    T  T   T    T    A AAAATTTTGTTTTTATTACTTAGTTTAGATCTTTCAGTTTTAA

miRNA cluster info.

miRNA locus ID miRNA locus accession Chromosome Strand Start End
Bra-MIR156b ,   Bra-MIR156q PmiREN002383, PmiREN002398 Bra-A06 + 22782170 22783068

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Brara.B01839.1 1.0 1 NA
Brara.C01719.1 1.0 1 NA
Brara.D00262.1 1.0 1 NA
Brara.D02060.1 1.0 1 NA
Brara.D02564.1 1.0 1 NA
Brara.E00270.1 1.0 1 NA
Brara.E01026.1 1.0 1 NA
Brara.F03810.1 1.0 NA NA
Brara.G00852.1 1.0 1 NA
Brara.G00853.1 1.0 1 NA
Brara.G01764.1 1.0 1 NA
Brara.G02852.1 1.0 0 NA
Brara.H02059.1 1.0 NA NA
Brara.I01777.1 1.0 NA NA
Brara.I03020.1 1.0 1 NA
Brara.I03021.1 1.5 1 NA
Brara.A03153.1 2.0 1 NA
Brara.C01519.1 2.0 1 NA
Brara.E02615.1 2.0 1 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference