Bra-MIR2111f

Basic info.

• miRNA locus ID
• Bra-MIR2111f

• miRNA locus accession
• PmiREN002493

• Organism
• Brassica rapa

• Genomic location
• Bra-A01  28822330  28822466  -

• Comments
• A member of family MIR2111

• Confidence level
• 

Secondary strurture and sequence

       G      CC                          -   ----   G          A      GT
  TATTG TGAGGA  GGGTAATCTGCATCCTGGGGTTTAAG GTT    TAA TACACGCAAA ATATGC  
  ||||| ||||||  |||||||||||||||||||||||||| |||    ||| |||||||||| ||||||   
  ATAAC ATTCCT  TCCATTAGGCGTAGGACTCCAGATTT CGA    ATT GTGTGTGTTT TATACG  
GC     -      TC                          T   TATG   -          A      CA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• Link To miRbase
• Link To PNDB

Reference

• No reference