Cru-MIR171c

Basic info.

• miRNA locus ID
• Cru-MIR171c

• miRNA locus accession
• PmiREN002776

• Organism
• Capsella rubella

• Genomic location
• Cru-scaffold_2  1254627  1254750  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  GCTATTGGTAAAC   G   A                       --    T  A    TTTT
               AAA ACG GATATTGGTGCGGTTCAATCAGA  AACT GT CTCT    
               ||| ||| |||||||||||||||||||||||  |||| || ||||    A
               TTT TGC CTATAACCGTGCCGAGTTAGTTT  TTGA TA GAGA    
GTACCTCAAAATAAA   G   A                       GT    C  -    TTTT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference