Cru-MIR394a

Basic info.

• miRNA locus ID
• Cru-MIR394a

• miRNA locus accession
• PmiREN002792

• Organism
• Capsella rubella

• Genomic location
• Cru-scaffold_1  7092612  7092742  +

• Comments
• A member of family MIR394

• Confidence level
• 

Secondary strurture and sequence

     T    T     C    -      TTC               -A      --TCT       TA
 AGAG TTCT ACAGA TTCT TTGGCA   TGTCCACCTCCTTCT  TACATA     GCATGTA  
 |||| |||| ||||| |||| ||||||   |||||||||||||||  ||||||     |||||||   
 TCTT GGGA TGTCT GAGA AACCGT   ATGGGTGGAGGAAGA  GTGTGT     CGTATAT  
T    T    T     A    T      CAT               AG      TTTAC       AT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference