Cru-MIR827

Basic info.

• miRNA locus ID
• Cru-MIR827

• miRNA locus accession
• PmiREN002819

• Organism
• Capsella rubella

• Genomic location
• Cru-scaffold_5  12415026  12415143  -

• Comments
• A member of family MIR827

• Confidence level
• 

Secondary strurture and sequence

 TTT     -C  T    T            T A      T  AT       TCA  ATC
    TGCAA  CC TGAA GTGTTTGTTGAT G CATCTA GC  ATCGATT   TC   
    |||||  || |||| |||||||||||| | |||||| ||  |||||||   ||    
    ACGTT  GG GCTT CGCAAACAACTA C GTAGAT TG  TAGCTAG   AG   
CTCT     TT  T    T            C A      T  GT       TTG  CTC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference