Esa-MIR160a

Basic info.

• miRNA locus ID
• Esa-MIR160a

• miRNA locus accession
• PmiREN005600

• Organism
• Eutrema salsugineum

• Genomic location
• Esa-scaffold_10  10128504  10128624  +

• Comments
• A member of family MIR160

• Confidence level
• 

Secondary strurture and sequence

A         T    A  ----     C       C         TA  AT   C       G
 TATATATAT GTAT TG    TATGC TGGCTCC TGTATGCCA  CA  GAG TCATCGA 
 ||||||||| |||| ||    ||||| ||||||| |||||||||  ||  ||| ||||||| T
 ATATATATA CATA AC    ATACG ACCGAGG GTATGCGGT  GT  TTC AGTAGCT 
          -    C  TCCT     T       A         AG  GC   C       A

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference