Esa-MIR162a

Basic info.

• miRNA locus ID
• Esa-MIR162a

• miRNA locus accession
• PmiREN005603

• Organism
• Eutrema salsugineum

• Genomic location
• Esa-scaffold_2  2641937  2642077  -

• Comments
• A member of family MIR162

• Confidence level
• 

Secondary strurture and sequence

    AAA      T A   T       G    C    C        C   C  GGAT      TT     GGTTG
       AAAGAG G AAG CGCTGGA GCAG GGTT ATCGATCT TTC TG    TTTTTG  TTTTT     
       |||||| | ||| ||||||| |||| |||| |||||||| ||| ||    ||||||  |||||     C
       TTTCTC C TTT GCGACCT CGTC CCAA TAGCTAGA AAG AC    GAAAAC  AAAGA     
CCAACTG      - G   -       A    T    A        C   T  ----      TT     AAGGT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference