Esa-MIR169c

Basic info.

• miRNA locus ID
• Esa-MIR169c

• miRNA locus accession
• PmiREN005627

• Organism
• Eutrema salsugineum

• Genomic location
• Esa-scaffold_1  7989367  7989491  +

• Comments
• A member of family MIR169

• Confidence level
• 

Secondary strurture and sequence

  G     AT      T    TT         AT          TTTCTT      --TG    TAA
   GAAGA  AGAGAA GAGG  GAGCCAAGG  GACTTGCCGA      TACCAA    AATC   
   |||||  |||||| ||||  |||||||||  ||||||||||      ||||||    ||||    
   CTTCT  TCTCTT CTTT  CTCGGTTCC  TTGAACGGCT      GTGGTT    TTAG   
TAG     CT      C    GT         AG          -----T      TTAA    TAA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference