Esa-MIR827

Basic info.

• miRNA locus ID
• Esa-MIR827

• miRNA locus accession
• PmiREN005666

• Organism
• Eutrema salsugineum

• Genomic location
• Esa-scaffold_19  1282364  1282476  +

• Comments
• A member of family MIR827

• Confidence level
• 

Secondary strurture and sequence

TTT    --   C     T            T  -      T  A         C CT
   TGCA  ACC TTGAA GTGTTTGTTGAT GG CATCTA GC AATCGATCA C  
   ||||  ||| ||||| |||||||||||| || |||||| || ||||||||| |  C
   ACGT  TGG AGCTT CGCAAACAACTA CC GTAGAT CG TTAGCTAGT G  
TCT    TT   T     T            -  A      T  G         T TG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference