Mac-MIR156f

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  GTGAGTGGGCATGATGGA          -     -               CTT   CC     C TCAA
                    GGTTGACAGA AGAGA GTGAGCACTCATGGT   TTC  GCATT A    
                    |||||||||| ||||| |||||||||||||||   |||  ||||| |     
                    TCAACTGTCT TCTCT CACTCGTGGGTATCG   AAG  CGTAA T    
CAACTGCACCCCAACCACCC          C     T               ---   CT     T TGGG

miRNA cluster info.

miRNA locus ID miRNA locus accession Chromosome Strand Start End
Mac-MIR156f ,   Mac-MIR156g PmiREN011986, PmiREN011987 Mac-chr2 - 16919053 16923980

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

GSMUA_Achr10T02970_001 1.0 1 NA
GSMUA_Achr10T23280_001 1.0 1 NA
GSMUA_Achr11T19580_001 1.0 NA NA
GSMUA_Achr3T05360_001 1.0 NA NA
GSMUA_Achr3T11170_001 1.0 1 NA
GSMUA_Achr3T27750_001 1.0 1 NA
GSMUA_Achr4T01450_001 1.0 1 NA
GSMUA_Achr4T05720_001 1.0 1 NA
GSMUA_Achr4T12470_001 1.0 1 NA
GSMUA_Achr5T22630_001 1.0 NA NA
GSMUA_Achr6T22280_001 1.0 1 NA
GSMUA_Achr6T36010_001 1.0 1 NA
GSMUA_Achr7T02020_001 1.0 1 NA
GSMUA_Achr8T23820_001 1.0 1 NA
GSMUA_Achr8T25550_001 1.0 1 NA
GSMUA_Achr9T14160_001 1.0 1 NA
GSMUA_Achr9T20220_001 1.0 NA NA
GSMUA_Achr9T23140_001 1.0 1 NA
GSMUA_Achr9T27660_001 1.0 1 NA
GSMUA_Achr4T03880_001 1.5 1 NA
GSMUA_Achr5T21990_001 1.5 1 NA
GSMUA_Achr5T25090_001 1.5 1 NA
GSMUA_Achr1T08440_001 2.0 2 NA
GSMUA_Achr2T03070_001 2.0 2 NA
GSMUA_Achr2T06150_001 2.0 1 NA
GSMUA_Achr4T16050_001 2.0 1 NA
GSMUA_Achr4T26940_001 2.0 1 NA
GSMUA_Achr4T33350_001 2.0 2 NA
GSMUA_Achr5T13440_001 2.0 1 NA
GSMUA_Achr6T06030_001 2.0 1 NA
GSMUA_Achr7T20510_001 2.0 1 NA
GSMUA_Achr7T22940_001 2.0 1 NA
GSMUA_Achr9T01380_001 2.0 1 NA
GSMUA_Achr9T29330_001 2.0 1 NA
GSMUA_AchrUn_randomT05850_001 2.0 1 NA
GSMUA_AchrUn_randomT08380_001 2.0 NA NA
GSMUA_AchrUn_randomT21900_001 2.0 1 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference