Mac-MIR157b

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
           -CAGTCT        TGTTGA       -             -T     CT    AGCT
       GAGG       GGTGATGC      CAGAAGA TAGAGAGCACAGA  GGTGA  TGCA    
       ||||       ||||||||      ||||||| |||||||||||||  |||||  ||||     
       CTCC       CCACTACG      GTCTTCT GTCTCTCGTGTTT  TCACT  ACGT    
CACGCCG    CCGCCTT        ------       T             CC     CT    CTTC

miRNA cluster info.

miRNA locus ID miRNA locus accession Chromosome Strand Start End
Mac-MIR157b ,   Mac-MIR482a PmiREN012008, PmiREN012211 Mac-chr3 + 28351981 28360427

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

GSMUA_Achr10T02970_001 1.5 1 NA
GSMUA_Achr10T23280_001 1.5 1 NA
GSMUA_Achr3T05360_001 1.5 NA NA
GSMUA_Achr3T11170_001 1.5 1 NA
GSMUA_Achr3T27750_001 1.5 1 NA
GSMUA_Achr4T01450_001 1.5 1 NA
GSMUA_Achr4T05720_001 1.5 1 NA
GSMUA_Achr4T12470_001 1.5 1 NA
GSMUA_Achr6T22280_001 1.5 1 NA
GSMUA_Achr6T36010_001 1.5 1 NA
GSMUA_Achr7T02020_001 1.5 1 NA
GSMUA_Achr8T23820_001 1.5 1 NA
GSMUA_Achr8T25550_001 1.5 1 NA
GSMUA_Achr9T14160_001 1.5 1 NA
GSMUA_Achr9T20220_001 1.5 NA NA
GSMUA_Achr9T23140_001 1.5 1 NA
GSMUA_Achr9T27660_001 1.5 1 NA
GSMUA_Achr4T03880_001 2.0 1 NA
GSMUA_Achr5T21990_001 2.0 1 NA
GSMUA_Achr5T25090_001 2.0 1 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference