Mac-MIR396h

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  CA  G           T C                      CC G    - GC
    TC AGCCTCTTCGT C TTTCCACAGCTTTCTTGAACTT  C TGGG C  
    || ||||||||||| | ||||||||||||||||||||||  | |||| |   
    AG TTGGAGAGGTA G AAGGGTGTCGAAAGGACTTGAA  G GCTC G  
CCTA  G           C T                      -C A    A GT

miRNA cluster info.

miRNA locus ID miRNA locus accession Chromosome Strand Start End
Mac-MIR396g ,   Mac-MIR396h PmiREN012189, PmiREN012190 Mac-chr4 - 20974624 20980117

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

GSMUA_Achr6T31010_001 1.0 0 NA
GSMUA_Achr2T06220_001 1.5 NA NA
GSMUA_Achr7T00440_001 1.5 NA NA
GSMUA_Achr10T18020_001 2.0 NA NA
GSMUA_Achr4T04350_001 2.0 2 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference