Sit-MIR169h

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
   TC          T    A   -         T    T       T    T TT    T    TC    -   GCTA  CT
     GATAGGAGCC GTCC GAT AGCCAAGGA GACT GCCTGTG GGCC C  GGAG GAGC  GAGC TTA    GC  
     |||||||||| |||| ||| ||||||||| |||| ||||||| |||| |  |||| ||||  |||| |||    ||  T
     CTATTCTCGG CGGG CTG TCGGTTCCT CTGA CGGACAC CTGG G  CTTC CTCG  TTCG AGT    CG  
GGAGT          -    C   A         -    -       T    T CC    T    -T    T   AGTA  TG

miRNA cluster info.

miRNA locus ID miRNA locus accession Chromosome Strand Start End
Sit-MIR169g ,   Sit-MIR169h ,   Sit-MIR169i PmiREN018662, PmiREN018663, PmiREN018664 Sit-scaffold_2 + 36921080 36926373

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Seita.5G055500.1 1.0 NA NA
Seita.5G055600.1 1.0 1 NA
Seita.9G010300.1 1.0 NA NA
Seita.1G338100.1 2.0 1 NA
Seita.2G383900.1 2.0 NA NA
Seita.3G390000.1 2.0 NA NA
Seita.9G155700.1 2.0 NA NA
Seita.9G367200.1 2.0 NA NA
Seita.9G521100.1 2.0 2 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference