Spo-MIR157b

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
AGGGGGAT   TA AT    ------T         -                 -   A     A  GA
        GTG  G  GTTG       TGACAGAAG ATAGAGAGCACAGATGA TGA GTGCA GG  
        |||  |  ||||       ||||||||| ||||||||||||||||| ||| ||||| ||  A
        CAC  C  CAAC       ACTGTCTTC TATCTCTCGTGTTTACT ACT TACGT CC  
    CTCC   TC GC    TTCTACT         A                 C   C     -  GG

miRNA cluster info.

miRNA locus ID miRNA locus accession Chromosome Strand Start End
Spo-MIR157b ,   Spo-MIR157c PmiREN020140, PmiREN020141 Spo-pseudo18 + 2269262 2270864

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Spipo10G0020600 1.5 1 NA
Spipo12G0064300 1.5 1 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference