Spo-MIR169b

Basic info.

• miRNA locus ID
• Spo-MIR169b

• miRNA locus accession
• PmiREN020155

• Organism
• Spirodela polyrhiza

• Genomic location
• Spo-pseudo12  4320642  4320761  -

• Comments
• A member of family MIR169

• Confidence level
• 

Secondary strurture and sequence

  AAGAGGCAGAGA  G     C                     ATTA       G   CTCC
              GT GAGTG AGCCAAGGATGACTTGCCGGC    GCGTGGC GTC    
              || ||||| |||||||||||||||||||||    ||||||| |||     
              CG TTTAC TCGGTTCCTGTTGGACGGCCG    TGTACCG CAG    
TACTCTCCTTCCCT  G     A                     ----       G   CCGC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 4177
• Chromosome: Spo-pseudo12
• Cluster start: 4314791
• Cluster end: 4320761

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference