Spo-MIR169d

Basic info.

• miRNA locus ID
• Spo-MIR169d

• miRNA locus accession
• PmiREN020157

• Organism
• Spirodela polyrhiza

• Genomic location
• Spo-pseudo28  1622298  1622435  -

• Comments
• A member of family MIR169

• Confidence level
• 

Secondary strurture and sequence

  AGA       G     A   C                   A    --G  G   GAACGAGCGAGCGAGC
     AGGAAGG GGCGG GTG AGCCAAGGATGACTTGCCG CGCT   GC TGC                
     ||||||| ||||| ||| ||||||||||||||||||| ||||   || |||                 
     TTCTTCT TCGTC TAC TCGGTTCTTGTTGAACGGC TGCC   CG GAG                
TACTC       G     A   A                   -    TAG  -   AAGTACTTCGGGCGAG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 4180
• Chromosome: Spo-pseudo28
• Cluster start: 1620193
• Cluster end: 1622435

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference