Bol-MIR398

Basic info.

• miRNA locus ID
• Bol-MIR398

• miRNA locus accession
• PmiREN024448

• Organism
• Brassica oleracea

• Genomic location
• Bol-C02  36449126  36449247  +

• Comments
• A member of family MIR398

• Confidence level
• 

Secondary strurture and sequence

TC       A   T A          G  C   --TT     TTTAAGA
  TCAAAGG GTG C TGAGAACACG AT CTC    GTTTC       
  ||||||| ||| | |||||||||| || |||    |||||       T
  AGTTTCC CAC G ACTCTTGTGT TA GAG    CAAAG       
 A       C   T G          -  T   TTAC     TCACCTT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• Link To miRbase
• Link To PNDB

Reference

• No reference