Oryza sativa

Oryza sativa, commonly known as Asian rice, is the plant species most commonly referred to in English as rice. Oryza sativa is a grass with a genomeconsisting of 430Mb across 12 chromosomes. It is renowned for being easy to genetically modify, and is a model organism for cereal biology. Oryza sativa contains two major subspecies: the sticky, short-grained japonica or sinica variety, and the nonsticky, long-grained indica rice [ja] variety. Japonica varieties are usually cultivated in dry fields (it is cultivated mainly submerged in Japan), in temperate East Asia, upland areas of Southeast Asia, and high elevations in South Asia, while indica varieties are mainly lowland rices, grown mostly submerged, throughout tropical Asia. Rice occurs in a variety of colors, including white, brown, black, purple, and red rices. Varieties include Indonesian black rice and Thai jasmine black rice. (from Wikipedia)


GSM ID Organism Tissue Reads count Published year Exp. data
GSM455938_SRR032097 Oryza sativa Seedling 5855189 2014-5-26 Download
GSM455939_SRR032098 Oryza sativa Panicle 5036936 2014-5-26 Download
GSM476257_SRR034102 Oryza sativa Inflorescence 14180363 2014-5-26 Download
GSM434596_SRR039716 Oryza sativa Seedling 4484125 2014-5-26 Download
GSM434596_SRR039717 Oryza sativa Seedling 4973346 2014-5-26 Download
GSM434596_SRR039718 Oryza sativa Seedling 4521204 2014-5-26 Download
GSM434596_SRR039719 Oryza sativa Seedling 4022844 2014-5-26 Download
GSM434596_SRR039720 Oryza sativa Seedling 3481085 2014-5-26 Download
GSM1522117_SRR1609324 Oryza sativa Leaf 10218475 2014-10-10 Download
GSM1522118_SRR1609325 Oryza sativa Leaf 11475919 2014-10-10 Download
GSM1626143_SRR1849887 Oryza sativa Leaf 3160761 2015-3-6 Download
GSM1626143_SRR1849888 Oryza sativa Leaf 3165598 2015-3-6 Download
GSM1626143_SRR1849889 Oryza sativa Leaf 3176512 2015-3-6 Download
GSM1626143_SRR1849890 Oryza sativa Leaf 3192829 2015-3-6 Download
GSM1626143_SRR1849891 Oryza sativa Leaf 3229742 2015-3-6 Download
GSM1626143_SRR1849892 Oryza sativa Leaf 3189945 2015-3-6 Download
GSM1626143_SRR1849893 Oryza sativa Leaf 3237100 2015-3-6 Download
GSM1626143_SRR1849894 Oryza sativa Leaf 2176729 2015-3-6 Download
GSM1626145_SRR1849902 Oryza sativa Leaf 2847404 2015-3-6 Download
GSM1626145_SRR1849903 Oryza sativa Leaf 2868724 2015-3-6 Download
GSM1626145_SRR1849904 Oryza sativa Leaf 2886921 2015-3-6 Download
GSM1626145_SRR1849905 Oryza sativa Leaf 2852522 2015-3-6 Download
GSM1626145_SRR1849906 Oryza sativa Leaf 2874329 2015-3-6 Download
GSM1626145_SRR1849907 Oryza sativa Leaf 3002650 2015-3-6 Download
GSM1626145_SRR1849908 Oryza sativa Leaf 2850222 2015-3-6 Download
GSM1626145_SRR1849909 Oryza sativa Leaf 2960271 2015-3-6 Download
GSM1626145_SRR1849910 Oryza sativa Leaf 2729039 2015-3-6 Download
GSM2053501_SRR3140958 Oryza sativa Leaf 12528886 2016-2-2 Download
GSM2053502_SRR3140959 Oryza sativa Leaf 11010233 2016-2-2 Download
GSM2053503_SRR3140960 Oryza sativa Leaf 12937477 2016-2-2 Download