Lsa-MIR171b

Basic info.

• miRNA locus ID
• Lsa-MIR171b

• miRNA locus accession
• PmiREN000000061

• Organism
• Lactuca sativa

• Genomic location
• Lsat_1_v8_lg_4  278390617  278390726  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

    C       T C     T         C       C      ATC      CCCT
   G ATGAAAG G AGCTA GATATTGGC TGGTTCA TCAGAT   TGAAAC    
   | ||||||| | ||||| ||||||||| ||||||| ||||||   ||||||    T
   T TACTTTC C TTGAT TTATAACCG GCCGAGT AGTCTA   GTTTTG    
ATT T       - C     T         T       T      ---      TAGT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference