Lsa-MIR171c

Basic info.

• miRNA locus ID
• Lsa-MIR171c

• miRNA locus accession
• PmiREN000000062

• Organism
• Lactuca sativa

• Genomic location
• Lsat_1_v8_lg_7  61723703  61723824  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  GGAGGAAGCAAATAA     C         TA       T    A  A -GA     CAA
                 GAAAG GATGTTGGT  GGTTCAA CTGA GT G   TTTAC   
                 ||||| |||||||||  ||||||| |||| || |   |||||   A
                 CTTTC CTATAACCG  CCGAGTT GACT TA C   AAATG   
CTTTTTGTTCATAGTTG     A         CG       C    C  A AGA     TAG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference