Lsa-MIR171f

Basic info.

• miRNA locus ID
• Lsa-MIR171f

• miRNA locus accession
• PmiREN000000065

• Organism
• Lactuca sativa

• Genomic location
• Lsat_1_v8_lg_4  92479219  92479345  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  ATCGGTATAACAATA     A                    C      AAT    GTTTTTA
                 ATACG GATGTTGGTGCGGTTCAATC GAAAGC   GCTC       
                 ||||| |||||||||||||||||||| ||||||   ||||       G
                 TATGC CTATAACCGTGCCGAGTTAG TTTTTG   CGAG       
GTCATCAACTTCATCAG     A                    T      CTC    AACTTGG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference