Ach-MIR171a

Basic info.

• miRNA locus ID
• Ach-MIR171a

• miRNA locus accession
• PmiREN000066

• Organism
• Actinidia chinensis

• Genomic location
• Ach-CM009663.1  18007950  18008213  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

TCCGTTTGATGT      TT      --AG   T    A   CTCAATGCC      --TC      CGACGTC  ATTCAAGGTTTGCATTTTTATAACCATCGATATTTTTAAGTTCAATTTGTTGTAAAAG
            CATCGT  TGATTG    CCG GCCA TAT         TTTTCA    TCTCAC       CC                                                          
            ||||||  ||||||    ||| |||| |||         ||||||    ||||||       ||                                                          A
            GTGGCA  ATTGAC    GGT CGGT ATG         AAAAGT    AGAGTG       AA                                                          
                  --      GATA   -    A   TACACAGAT      TAAA      --AAGAT  TGTAAGTAGGTGTTGTGTGTGGTTGTCTAAGTTTTTGACTTACTTTATCAGTAAAAAA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference