Aof-MIR171h

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
 G    --TA        T    CA                     CATCTCAAATATAAT     A
C TTGC    CTTTTGAA GTGT  TGTTGATGGTCATCTAACAAT               ATCTT 
| ||||    |||||||| ||||  |||||||||||||||||||||               ||||| T
G GACG    GGAGACTT CACA  ACAACTACCAGTAGATTGTTA               TAGAA 
 A    TACG        T    -A                     -------CTCAAAAT     A

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

XM_020385654.1 0.0 NA NA
XM_020406557.1 1.5 NA NA
XM_020416286.1 2.0 NA NA
XR_002243382.1 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference