Bju-MIR171f

Basic info.

• miRNA locus ID
• Bju-MIR171f

• miRNA locus accession
• PmiREN001661

• Organism
• Brassica juncea

• Genomic location
• Bju-CM007192.1  27846136  27846259  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

GTTGATGTAAA   --AAC   A      A             A     --   TA    TAGC
           GGT     GCG GATATT GTGCGGTTCAATC AATGG  TCG  CTCT    
           |||     ||| |||||| ||||||||||||| |||||  |||  ||||     
           CCA     CGC CTATAA CGTGCCGAGTTAG TTGTT  GGC  GAGA    
AGACGGTACAA   AAATA   A      C             C     TT   TA    TTAT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference