Bju-MIR171g

Basic info.

• miRNA locus ID
• Bju-MIR171g

• miRNA locus accession
• PmiREN001662

• Organism
• Brassica juncea

• Genomic location
• Bju-CM007193.1  58656270  58656393  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  TGATGTAAGCTGGTCAA   A      A             A     TC   C    AGTT
                   GCG GATATT GTGCGGTTCAATC AATAG  TCA TCTT    
                   ||| |||||| ||||||||||||| |||||  ||| ||||     
                   CGC CTATAA CGTGCCGAGTTAG TTGTT  AGT AGAG    
TATTGGTAGAACCAATATA   A      C             C     TT   T    ATAG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference