Bju-MIR171i

Basic info.

• miRNA locus ID
• Bju-MIR171i

• miRNA locus accession
• PmiREN001664

• Organism
• Brassica juncea

• Genomic location
• Bju-CM007201.1  18942854  18942977  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

TTATGATGTAA   --A     A      A             A     TCG  T    ACTT
           GGT   ACGCG GATATT GTGCGGTTCAATC AATAG   TG TCTC    
           |||   ||||| |||||| ||||||||||||| |||||   || ||||     
           CCA   TGCGC CTATAA CGTGCCGAGTTAG TTGTT   GC AGAG    
AAACGGCAAAA   AAC     A      C             C     TTG  T    ATAG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference