Bna-MIR171a

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  TGATGTAAGCTGGTCAAGCGA      A             A     TC   C    AGTT
                       GATATT GTGCGGTTCAATC AATAG  TCA TCTT    
                       |||||| ||||||||||||| |||||  ||| ||||     
                       CTATAA CGTGCCGAGTTAG TTGTT  AGT AGAG    
TATTGGTAGAACCAATATACGCA      C             C     TT   T    ATAG

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

XM_013832628.2 1.5 NA 0 (1)
XM_013852286.2 1.5 NA 0 (1)
XM_022718497.1 1.5 NA 0 (2)
XR_002663632.1 1.5 NA 0 (1)
XM_013841612.2 1.5 NA 1 (1)
XM_013872928.2 1.5 NA 4 (1)
XM_013879337.2 1.5 NA 4 (1)
XM_013797403.2 1.5 NA NA
XM_013830007.2 1.5 NA NA
XM_013881692.2 1.5 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference