Bna-MIR171c

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
      G    AAA   --AAC   A      A             A     --   TA    TAGC
   GTT ATGT   GGT     GCG GATATT GTGCGGTTCAATC AATAG  TCG  CTCT    
   ||| ||||   |||     ||| |||||| ||||||||||||| |||||  |||  ||||     
   CGG TACA   CCA     CGC CTATAA CGTGCCGAGTTAG TTGTT  GGC  GAGA    
AAA   -    --A   AAATA   A      C             C     TT   TA    TTAT

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

XM_013797403.2 1.5 NA NA
XM_013830007.2 1.5 NA NA
XM_013832628.2 1.5 NA NA
XM_013841612.2 1.5 NA NA
XM_013852286.2 1.5 NA NA
XM_013872928.2 1.5 NA NA
XM_013879337.2 1.5 NA NA
XM_013881692.2 1.5 NA NA
XM_022718497.1 1.5 NA NA
XR_002663632.1 1.5 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference