Bni-MIR171b

Basic info.

• miRNA locus ID
• Bni-MIR171b

• miRNA locus accession
• PmiREN002261

• Organism
• Brassica nigra

• Genomic location
• Bni-CM004495.1  32366594  32366717  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

TG    AA -  -   --A     A      A             A    --    CA    TAGT
  ATGT  G CT GGT   ATGCG GATATT GTGCGGTTCAATC AATA  GTCA  CTCT    
  ||||  | || |||   ||||| |||||| ||||||||||||| ||||  ||||  ||||     
  TATA  T GA CCA   TACGC CTATAA CGTGCCGAGTTAG TTGT  TAGT  GAGA    
      GG A  A   ATA     A      C             C    TT    TA    TAGT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference