Bni-MIR171c

Basic info.

• miRNA locus ID
• Bni-MIR171c

• miRNA locus accession
• PmiREN002262

• Organism
• Brassica nigra

• Genomic location
• Bni-CM004496.1  18058459  18058582  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  TTACGATGTAATGTA     A      A             A     --   TG    TACT
                 ACGCG GATATT GTGCGGTTCAATC AATAG  TCG  CTCT    
                 ||||| |||||| ||||||||||||| |||||  |||  ||||     
                 TGCGC CTATAA CGTGCCGAGTTAG TTGTT  GGC  GAGA    
AAACGGTAAAACCAAAC     A      C             C     TT   TA    TGGT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference