Can-MIR171e

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
    CTAC   -   TCA             A           T   A     TT    CAT
        GCA GCT   AGTGTGATGTTGG ATGGCTCAATC GAT AAAAT  CCAA   
        ||| |||   ||||||||||||| ||||||||||| ||| |||||  ||||    
        CGT CGG   TTATACTATAACC TGCCGAGTTAG TTA TTTTA  GGTT   
TGAGTGCT   T   ---             G           T   A     CT    TTT

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

XM_016690051.1 0.5 NA NA
XM_016713779.1 0.5 NA NA
XM_016713784.1 0.5 NA NA
XM_016705099.1 1.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference