Can-MIR171f

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
    G  GG  -   TATT     G                          C  TT      CA
  AA TT  AG GTA    ATACG GATGTTGGTGCGGTTCAATGAGAAAG AG  GTCAAA  
  || ||  || |||    ||||| |||||||||||||||||||||||||| ||  ||||||   
  TT AA  TC CAT    TGTGC CTATAACCGTGCCGAGTTATTTTTTC TC  CAGTTT  
TC  G  AA  T   -CAC     A                          A  -C      GA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

XM_016713779.1 0.5 NA NA
XM_016713784.1 0.5 NA NA
XM_016705099.1 1.0 NA NA
XM_016690051.1 1.5 NA NA
XM_016714660.1 2.0 2 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference