Can-MIR171h

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
   A           G   T  C                   ---   CTC     TT
    ATGGAGAAGGA ACA GG GTGATATTGGTTCGGCTCA   CTA   TCTGA  
    ||||||||||| ||| || |||||||||||||||||||   |||   |||||   
    TACTTCTTCTT TGT CT CACTATAACCAAGCCGAGT   GAT   AGACT  
TGCG           A   T  -                   ATA   --T     AC

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

XM_016714660.1 0.0 0 NA
XR_001672770.1 0.0 1 NA
XM_016690443.1 1.5 NA NA
XM_016718747.1 1.5 NA NA
XM_016718751.1 1.5 NA NA
XM_016714159.1 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference