Cti-MIR171d

Basic info.

• miRNA locus ID
• Cti-MIR171d

• miRNA locus accession
• PmiREN003326

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01268449.1  2729  2849  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  GGTATAACAATA     A                             T      TTTAG
              ATACG GATGTTGGTGCGGTTCAATCGGAAAGCAA GCTCTT     
              ||||| ||||||||||||||||||||||||||||| ||||||     G
              TATGC CTATAACCGTGCCGAGTTAGTTTTTTGTT TGAGAG     
ATCAATTTCATCAG     A                             C      CTTTG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference