Cti-MIR171e

Basic info.

• miRNA locus ID
• Cti-MIR171e

• miRNA locus accession
• PmiREN003327

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01185673.1  1077  1197  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

    TCGGGAAGCA   AA     C          A         C  A  -  -GA     CAG
              GAT  GAAAG GATGTTGGTG GGTTCAATC GA GA CG   TTTAC   
              |||  ||||| |||||||||| ||||||||| || || ||   |||||    
              CTG  CTTTC CTATAACCGC CCGAGTTAG CT CT GC   AAATG   
TTCGTTCGCACAGA   --     A          G         A  -  A  AGA     TTG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference