Cti-MIR171f

Basic info.

• miRNA locus ID
• Cti-MIR171f

• miRNA locus accession
• PmiREN003328

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01282281.1  10054  10174  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

   GATGG       G   T  C          C          GGGTTTAATG      TA
        AGAAATA ACA GG GTGGTATTGG TCGGTTCATC          TCTGTA  
        ||||||| ||| || |||||||||| ||||||||||          ||||||  T
        TCTTTGT TGT CT CACTATAACC AGCCGAGTAG          GGGTAT  
AAAGTGTT       A   T  -          A          ACATCTGATG      TA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference