Car-MIR171a

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
ATGA          T    T         C       C      -    --    -   T      TAC
    ATGAAGTAGT ATTG GATATTGGC TGGTTCA TCAGAC CAAG  TGAT CAC AAGATA   
    |||||||||| |||| ||||||||| ||||||| |||||| ||||  |||| ||| ||||||    
    TACTTTATCA TAAT CTATAACCG GCCGAGT AGTTTG GTTT  GCTG GTG TTTTGT   
 TTC          -    T         T       T      T    TA    T   T      TAT

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

XM_004506417.2 0.5 NA NA
XM_004515408.2 0.5 NA NA
XM_004515409.2 0.5 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference