Car-MIR171c

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  CACCGTCTTAATTGG     A           A           -    CGT      TGA
                 GTATG GATATTGGTAC GTTCAATCAAA AGGA   GTTTTA   
                 ||||| ||||||||||| ||||||||||| ||||   ||||||    
                 TATAC CTATAACCGTG CGAGTTAGTTT TTCT   CGAAAT   
ATCTTTATATCTATCAA     A           C           A    -TT      CTA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

XM_004506417.2 1.5 NA NA
XM_004515408.2 1.5 NA NA
XM_004515409.2 1.5 NA NA
XM_004499350.2 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference