Cla-MIR171b

Basic info.

• miRNA locus ID
• Cla-MIR171b

• miRNA locus accession
• PmiREN004235

• Organism
• Citrullus lanatus

• Genomic location
• Cla-AGCB01007473.1  6738  6858  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  AGAATGAAGGTTAGA  C        G  A        T  -  C          TTTCC
                 AG GATGTTGG GC GTTCAATC GA AG CCGAGTTTTG     
                 || |||||||| || |||||||| || || ||||||||||      
                 TC CTATAACC CG CGAGTTAG CT TC GGTTTAAAAT     
AATGCTTCGTTTTCTTT  A        G  C        T  C  T          CTCTT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference