Cla-MIR171h

Basic info.

• miRNA locus ID
• Cla-MIR171h

• miRNA locus accession
• PmiREN004241

• Organism
• Citrullus lanatus

• Genomic location
• Cla-AGCB01006629.1  7077  7256  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

     TTTTGATAC   -  T  A            T       T     -G         A   T   -GAAAGAAAAAGA      AAAAG
  GAG         TTG GA GA GGTATTGACGTG CTCAATT GAAAG  TACATGGTT AGA CAA             AAAATA     
  |||         ||| || || |||||||||||| ||||||| |||||  ||||||||| ||| |||             ||||||     A
  CTC         AAC CT CT CTATAACTGCGC GAGTTAG CTTTT  GTGTGCCGG TTT GTT             TTTTAT     
GC   CACGTTTTT   T  T  -            C       T     GT         A   -   AATTATTAAAGGA      AGAAA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference