Ccl-MIR171b

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
ATTCCACAAA    ---   A                    TGAG     T    AAAGTC
          GCAT   ACG GATATTGGCGCGGTTCAATC    AGCAG GCTC      
          ||||   ||| ||||||||||||||||||||    ||||| ||||       
          CGTG   TGC CTATAACCGTGCCGAGTTAG    TTGTC CGAG      
 CTTAACTAA    CAC   A                    TTTA     C    AAGAAT

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Ciclev10018916m 0.5 NA NA
Ciclev10019083m 0.5 NA NA
Ciclev10019094m 0.5 NA NA
Ciclev10002302m 1.5 NA NA
Ciclev10003933m 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference