Ccl-MIR171f

Basic info.

• miRNA locus ID
• Ccl-MIR171f

• miRNA locus accession
• PmiREN004413

• Organism
• Citrus clementina

• Genomic location
• Ccl-scaffold_1  25748190  25748315  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  AGCAAGAAAAAAAACGA   C          A         C  A  -  -GA      - ATT
                   AAG GATATTGGTG GGTTCAATC GA GA CG   TTTACA C   
                   ||| |||||||||| ||||||||| || || ||   |||||| |    
                   TTC CTATAACCGC CCGAGTTAG CT CT GC   AAATGT G   
TATAAGTAAAAATATTTAA   A          G         A  -  A  AGA      T AAG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference