Cit-MIR171a

Basic info.

• miRNA locus ID
• Cit-MIR171a

• miRNA locus accession
• PmiREN004569

• Organism
• Citrus maxima

• Genomic location
• Cit-CM007748.1  515502  515638  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

   AT         T   C T         C       C      ---------     -  TTTA        TA
     ATGAAAGGG AGC G GATATTGGC TGGTTCA TCAGAC         AAACC GG    TTTGCTTT  
     ||||||||| ||| | ||||||||| ||||||| ||||||         ||||| ||    ||||||||   
     TACTTTCTC TTG C CTATAACCG GCCGAGT AGTTTG         TTTGG CC    AAACGAGA  
CTTTT         T   - T         T       T      GTTTTGTTT     A  -TTG        TT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference