Cit-MIR171b

Basic info.

• miRNA locus ID
• Cit-MIR171b

• miRNA locus accession
• PmiREN004570

• Organism
• Citrus maxima

• Genomic location
• Cit-CM007749.1  9958289  9958403  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

      G   -    AA   T            A        C  TC   ATT      G
   GTA TAG GAGT  AGT TGATGTTGGCAT GCTCAATC GA  AAA   CTCAGT 
   ||| ||| ||||  ||| |||||||||||| |||||||| ||  |||   |||||| C
   TAT ATC CTTA  TTA ACTATAACCGTG CGAGTTAG CT  TTT   GAGTCG 
TAC   -   T    -C   C            C        T  TA   CCT      A

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference