Cit-MIR171c

Basic info.

• miRNA locus ID
• Cit-MIR171c

• miRNA locus accession
• PmiREN004571

• Organism
• Citrus maxima

• Genomic location
• Cit-CM007749.1  46241516  46241633  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

ATTCCACAAA    ---   A                    TGAG     T    AAAGTC
          GCAT   ACG GATATTGGTGCGGTTCAATC    AGCAG GCTC      
          ||||   ||| ||||||||||||||||||||    ||||| ||||       
          CGTG   TGC CTATAACCGTGCCGAGTTAG    TTGTC CGAG      
 CTTAACTAA    CAC   A                    TTTA     C    AAGAAT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference