Cit-MIR171d

Basic info.

• miRNA locus ID
• Cit-MIR171d

• miRNA locus accession
• PmiREN004572

• Organism
• Citrus maxima

• Genomic location
• Cit-CM007750.1  29590333  29590451  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  TACT   A   T     C         C       T      -  -----          A
      GAA TAG CACTG GATATTGGC CGGTTCA TCAGAG CT     TAAGCGTTTA 
      ||| ||| ||||| ||||||||| ||||||| |||||| ||     |||||||||| G
      CTT ATT GTGAT CTATAACCG GCCGAGT AGTTTC GG     GTTCGTAAGT 
CACAAT   C   C     T         T       T      A  TGGTC          C

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference