Cit-MIR171f

Basic info.

• miRNA locus ID
• Cit-MIR171f

• miRNA locus accession
• PmiREN004574

• Organism
• Citrus maxima

• Genomic location
• Cit-CM007749.1  21080777  21080898  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  AGGATGGATGGGTACT    G                   A     A   T      TAC
                  CACG GATATTGGTGCGGTTCAAT AGAAA CGG GCTCAA   
                  |||| ||||||||||||||||||| ||||| ||| ||||||    
                  GTGC CTATAACCGCGCCGAGTTA TTTTT GCC CGAGTT   
GTTAATCTCTCGCTCACC    A                   G     C   T      TTT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference