Cit-MIR171i

Basic info.

• miRNA locus ID
• Cit-MIR171i

• miRNA locus accession
• PmiREN004577

• Organism
• Citrus maxima

• Genomic location
• Cit-CM007752.1  19307309  19307447  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

   GATTGGA      G   T  T                  A   TAATTAAT    TA    ----TTC    CT
          GAAGTA ACA GG GTGATATTGGTTCGGCTC TCT        AGAT  ATAT       AGCC  
          |||||| ||| || |||||||||||||||||| |||        ||||  ||||       ||||  T
          CTTCGT TGT TC CACTATAACTAAGCCGAG AGA        TCTA  TATG       TTGG  
AGTTTTCTTT      A   -  T                  C   --------    TA    TACATTC    AA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference