Cme-MIR171c

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
   AATTTT   ATCG    T        A               C   TCT    TG
         CGT    TGTC GATGTTGG ACGGTTCAATCAAAT AAA   CCTA  
         |||    |||| |||||||| ||||||||||||||| |||   ||||  A
         GCA    GCAG CTATAACC TGCCGAGTTAGTTTA TTT   GGGT  
TTTTCAAAT   GTTA    -        G               A   TCT    TA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

XM_008450640.2 0.5 NA NA
XM_008459909.2 0.5 NA NA
XM_008455503.2 1.5 1 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference