Cma-MIR171f

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
    T         TTTTA  -   A         T                C  T  T TGCTT
     GGTGGGATT     GA ACG GATGTTGGT CGGTTCAATAAGAAAG AG GC C     
     |||||||||     || ||| ||||||||| |||||||||||||||| || || |      
     TCGTTTTAA     CT TGC CTATAACCG GCCGAGTTATTTTTTC TC TG G     
AATAT         ---TG  G   A         T                A  T  T TTCAA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

XM_023144304.1 1.5 NA NA
XM_023149535.1 1.5 NA NA
XM_023150753.1 1.5 NA NA
XM_023151952.1 1.5 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference